Non-target effects of agri-environmental schemes on solitary bees and fungi in the United Kingdom.

Agri-environmental schemes (AES) are used to enhance pollinator diversity on agricultural farms within the UK. Though the impacts of these schemes on archetypal pollinator species such as the bumblebee (Bombus) and honeybee (Apis) are well-studied, the effects on non-target bee species like solitary bees, in the same environment, are generally lacking. One goal of AES is to alter floral provision and taxonomic composition of plant communities to provide better forage for pollinators, however, this may potentially impact other ecological communities such as fungal diversity associated with plant-bee communities. Fungi are integral in these bee communities as they can impact bee species both beneficially and detrimentally. We test the hypothesis that alteration of the environment through provision of novel plant communities has non-target effects on the fungi associated with solitary bee communities. We analyse fungal diversity and ecological networks formed between fungi and solitary bees present on 15 agricultural farms in the UK using samples from brood cells. The farms were allocated to two categories, low and high management, which differ in the number of agri-environmental measures implemented. Using internal transcribed spacer metabarcoding, we identified 456 fungal taxa that interact with solitary bees. Of these, 202 (approximately 44%) could be assigned to functional groups, the majority being pathotrophic and saprotrophic species. A large proportion was Ascosphaeraceae, a family of bee-specialist fungi. We considered the connectance, nestedness, modularity, nestedness overlap and decreasing fill, linkage density and fungal generality of the farms' bee-fungi ecological networks. We found no difference in the structure of bee-fungi ecological networks between low and high management farms, suggesting floral provision by AES has no significant impact on interactions between these two taxonomic groups. However, bee emergence was lower on the low management farms compared to high management, suggesting some limited non-target effects of AES. This study characterizes the fungal community associated with solitary bees and provides evidence that floral provision through AES does not impact fungal interactions.

Mapping global conservation priorities and habitat vulnerabilities for cave-dwelling bats in a changing world.

Research and media attention is disproportionately focused on taxa and ecosystems perceived as charismatic, while other equally diverse systems such as caves and subterranean ecosystems are often neglected in biodiversity assessments and prioritisations. Highlighting the urgent need for protection, an especially large fraction of cave endemic species may be undescribed. Yet these more challenging systems are also vulnerable, with karsts for example losing a considerable proportion of their area each year. Bats are keystone to cave ecosystems making them potential surrogates to understand cave diversity patterns and identify conservation priorities. On a global scale, almost half (48 %) of known bat species use caves for parts of their life histories, with 32 % endemic to a single country, and 15 % currently threatened. We combined global analysis of cave bats from the IUCN spatial data with site-specific analysis of 1930 bat caves from 46 countries to develop global priorities for the conservation of the most vulnerable subterranean ecosystems. Globally, 28 % of caves showed high bat diversity and were highly threatened. The highest regional concentration of conservation priority caves was in the Palearctic and tropical regions (except the Afrotropical, which requires more intensive cave data sampling). Our results further highlight the importance of prioritising bat caves by incorporating locally collected data and optimising parameter selection (i.e., appropriate landscape features and threats). Finally, to protect and conserve these ecosystems it is crucial that we use frameworks such as this to identify priorities in species and habitat-level and map vulnerable underground habitats with the highest biodiversity and distinctiveness.

The structure of tropical bat-plant interaction networks during an extreme El Niño-Southern Oscillation event.

Interaction network structure reflects the ecological mechanisms acting within biological communities, which are affected by environmental conditions. In tropical forests, higher precipitation usually increases fruit production, which may lead frugivores to increase specialization, resulting in more modular and less nested animal-plant networks. In these ecosystems, El Niño is a major driver of precipitation, but we still lack knowledge of how species interactions change under this influence. To understand bat-plant network structure during an extreme El Niño-Southern Oscillation event, we determined the links between plantivorous bat species and the plants they consume by DNA barcoding seeds and pulp in bat faeces. These interactions were recorded in the dry forest and rainforest of Costa Rica, during the dry and the wet seasons of an extreme El Niño year. From these we constructed seasonal and whole-year bat-plant networks and analysed their structures and dissimilarities. In general, networks had low nestedness, had high modularity, and were dominated by one large compartment which included most species and interactions. Contrary to our expectations, networks were less nested and more modular in drier conditions, both in the comparison between forest types and between seasons. We suggest that increased competition, when resources are scarce during drier seasons and habitats, lead to higher resource partitioning among bats and thus higher modularity. Moreover, we have found similar network structures between dry and rainforests during El Niño and non-El Niño years. Finally, most interaction dissimilarity among networks occurred due to interaction rewiring among species, potentially driven by seasonal changes in resource availability.

Conserving the forgotten: New insights from a Central African biodiversity hotspot on the anthropogenic perception of nocturnal primates (Mammalia: Strepsirrhini).

The growing dependence of villagers on local forests (food, wood, etc.) makes the comparative assessment of the perceptions they have of the forest and its wildlife increasingly important for setting conservation priorities. While hunting and habitat loss are important threats to primates' existence worldwide, more attention has been focused on diurnal species, while little is known about their nocturnal counterparts. Strepsirrhini is a group of nocturnal primates with galago and potto as the only representatives on mainland Africa. To assess the perception of locals and their impacts on the conservation of these primates, questionnaires were administered to 79 household heads in four villages located in community forests around Mount Cameroon National Park. Amongst the respondents, over 90% admitted that these animals are eaten in their communities. Nocturnal primates were not only hunted for food, but also used in medicine and rituals and to make drums. However, the habit of eating nocturnal primates seems to be uncommon, as most respondents had not consumed any primate bushmeat in the last 5 years. The knowledge and support of wildlife conservation manifested by the villagers did not reflect the reality on the ground, as forest clearing for agriculture takes place regularly across the villages. Our findings suggest that bushmeat is not the main threat to nocturnal primates in this area, with habitat loss potentially representing a bigger problem for their existence in the near future.

Assessing the impact of taxon resolution on network structure.

Constructing ecological networks has become an indispensable approach in understanding how different taxa interact. However, the methods used to generate data in network research vary widely among studies, potentially limiting our ability to compare results meaningfully. In particular, methods of classifying nodes vary in their precision, likely altering the architecture of the network studied. For example, rather than being classified as Linnaean species, taxa are regularly assigned to morphospecies in observational studies, or to molecular operational taxonomic units (MOTUs) in molecular studies, with the latter defined based on an arbitrary threshold of sequence similarity. Although the use of MOTUs in ecological networks holds great potential, especially for allowing rapid construction of large data sets of interactions, it is unclear how the choice of clustering threshold can influence the conclusions obtained. To test the impact of taxonomic precision on network architecture, we obtained and analyzed 16 data sets of ecological interactions, inferred from metabarcoding and observations. Our comparisons of networks constructed under a range of sequence thresholds for assigning taxa demonstrate that even small changes in node resolution can cause wide variation in almost all key metric values. Moreover, relative values of commonly used metrics such as robustness were seen to fluctuate continuously with node resolution, thereby potentially causing error in conclusions drawn when comparing multiple networks. In observational networks, we found that changing node resolution could, in some cases, lead to substantial changes to measurements of network topology. Overall, our findings highlight the importance of classifying nodes to the greatest precision possible, and demonstrate the need for caution when comparing networks that differ with respect to node resolution, even where taxonomic groups and interaction types are similar. In such cases, we recommend that comparisons of networks should focus on relative differences rather than absolute values between the networks studied.

Availability of food resources and habitat structure shape the individual-resource network of a Neotropical marsupial.

Spatial and temporal variation in networks has been reported in different studies. However, the many effects of habitat structure and food resource availability variation on network structures have remained poorly investigated, especially in individual-based networks. This approach can shed light on individual specialization of resource use and how habitat variations shape trophic interactions.To test hypotheses related to habitat variability on trophic interactions, we investigated seasonal and spatial variation in network structure of four populations of the marsupial Gracilinanus agilis in the highly seasonal tropical savannas of the Brazilian Cerrado.We evaluated such variation with network nestedness and modularity considering both cool-dry and warm-wet seasons, and related such variations with food resource availability and habitat structure (considered in the present study as environmental variation) in four sites of savanna woodland forest.Network analyses showed that modularity (but not nestedness) was consistently lower during the cool-dry season in all G. agilis populations. Our results indicated that nestedness is related to habitat structure, showing that this metric increases in sites with thick and spaced trees. On the other hand, modularity was positively related to diversity of arthropods and abundance of fruits.We propose that the relationship between nestedness and habitat structure is an outcome of individual variation in the vertical space and food resource use by G. agilis in sites with thick and spaced trees. Moreover, individual specialization in resource-rich and population-dense periods possibly increased the network modularity of G. agilis. Therefore, our study reveals that environment variability considering spatial and temporal components is important for shaping network structure of populations.

Spatiotemporal and demographic variation in the diet of New Zealand lesser short-tailed bats (Mystacina tuberculata).

Variation in the diet of generalist insectivores can be affected by site-specific traits including weather, habitat, and season, as well as demographic traits such as reproductive status and age. We used molecular methods to compare diets of three distinct New Zealand populations of lesser short-tailed bats, Mystacina tuberculata. Summer diets were compared between a southern cold-temperate (Eglinton) and a northern population (Puroera). Winter diets were compared between Pureora and a subtropical offshore island population (Hauturu). This also permitted seasonal diet comparisons within the Pureora population. Lepidoptera and Diptera accounted for >80% of MOTUs identified from fecal matter at each site/season. The proportion of orders represented within prey and the Simpson diversity index, differed between sites and seasons within the Pureora population. For the Pureora population, the value of the Simpson diversity index was higher in summer than winter and was higher in Pureora compared to Eglinton. Summer Eglinton samples revealed that juvenile diets appeared to be more diverse than other demographic groups. Lactating females had the lowest dietary diversity during summer in Pureora. In Hauturu, we found a significant negative relationship between mean ambient temperature and prey richness. Our data suggest that M. tuberculata incorporate a narrower diversity of terrestrial insects than previously reported. This provides novel insights into foraging behavior and ecological interactions within different habitats. Our study is the first from the Southern Hemisphere to use molecular techniques to examine spatiotemporal variation in the diet of a generalist insectivore that inhabits a contiguous range with several habitat types and climates.

ATLANTIC BATS: a data set of bat communities from the Atlantic Forests of South America.

Bats are the second most diverse mammal order and they provide vital ecosystem functions (e.g., pollination, seed dispersal, and nutrient flux in caves) and services (e.g., crop pest suppression). Bats are also important vectors of infectious diseases, harboring more than 100 different virus types. In the present study, we compiled information on bat communities from the Atlantic Forests of South America, a species-rich biome that is highly threatened by habitat loss and fragmentation. The ATLANTIC BATS data set comprises 135 quantitative studies carried out in 205 sites, which cover most vegetation types of the tropical and subtropical Atlantic Forest: dense ombrophilous forest, mixed ombrophilous forest, semideciduous forest, deciduous forest, savanna, steppe, and open ombrophilous forest. The data set includes information on more than 90,000 captures of 98 bat species of eight families. Species richness averaged 12.1 per site, with a median value of 10 species (ranging from 1 to 53 species). Six species occurred in more than 50% of the communities: Artibeus lituratus, Carollia perspicillata, Sturnira lilium, Artibeus fimbriatus, Glossophaga soricina, and Platyrrhinus lineatus. The number of captures divided by sampling effort, a proxy for abundance, varied from 0.000001 to 0.77 individuals·h-1 ·m-2 (0.04 ± 0.007 individuals·h-1 ·m-2 ). Our data set reveals a hyper-dominance of eight species that together that comprise 80% of all captures: Platyrrhinus lineatus (2.3%), Molossus molossus (2.8%), Artibeus obscurus (3.4%), Artibeus planirostris (5.2%), Artibeus fimbriatus (7%), Sturnira lilium (14.5%), Carollia perspicillata (15.6%), and Artibeus lituratus (29.2%).

The response of bats (Mammalia: Chiroptera) to an incidental fire on a gallery forest at a Neotropical savanna / Resposta dos morcegos (Mammalia: Chiroptera) a queimada acidental em mata de galeria de uma savana Neotropical

Fire is a common and natural event in Cerrado that can influence the composition of trees and mammals and change the entire conditions of the environment. This study was developed in a gallery forest of Distrito Federal - Brazil. Bat samplings were conducted for a total of six nights after a fire that happened on the gallery forest. Three samplings were conducted: one day, three months and seven months after fire. A total of nine mist nets (12 m x 3 m) were opened from 7pm to 1am. Captured bats were measured and identified to species. Shannon index measured the species diversity of bats in the gallery forest over time. A rarefaction curve was made to assess the estimated bat richness in each of the samplings and a chi-square test was used to check whether there have been changes on bat abundances over time. A total of 46 bats from 8 different species and one family were captured. The most abundant species was Sturnira lilium. Species diversity and abundance increased over time and there was a gradual accumulation of species and specimens indicating that the succession and recovery of the forest occurs due to a temporal addition of specimens and species in the assemblage and not as punctual occurrences. Probably, this recovery pattern reflects a gradual increase in the availability of resources and recovery of the forest canopy, progressively offering more shelter and food for the bat assemblage.

O fogo é um evento comum e natural no Cerrado que pode influenciar a composição de árvores e mamíferos e mudar totalmente as condições do ambiente. Esse estudo foi desenvolvido na mata de galeria do Distrito Federal - Brazil. As amostragens dos morcegos foram conduzidas por um total de seis noites depois da ocorrência do fogo na mata de galeria. Três amostragens foram conduzidas: um dia, três meses e sete meses depois que o fogo ocorreu. Um total de nove redes de neblina (12 m x 3 m) foram abertas das 7pm a 1am. Os morcegos capturados foram medidos e identificados ao nível de espécie. O índice de Shannon mediu a diversidade de espécies de morcegos na mata de galeria ao longo do tempo. Uma curva de rarefação foi feita para acessar a riqueza estimada de morcegos em cada amostragem e um teste qui-quadrado foi usado para verificar se houve mudanças na abundância de morcegos ao longo do tempo. Um total de 46 morcegos de 8 espécies diferentes e uma família foram capturados. A espécie mais abundante foi Sturnira lilium. A diversidade de espécies e abundância aumentaram com o tempo e houve um acúmulo gradual de espécies e espécimes indicando que a sucessão e recuperação da mata ocorreu com uma adição temporal de espécimes e espécies na assembleia e não de forma pontual. Provavelmente, o padrão de recuperação reflete o aumento gradual na disponibilidade de recursos alimentares e recuperação do dossel da mata, que progressivamente passaram a ofertar mais abrigo e alimento para a assembleia de morcegos.

Correction: Sexual Dimorphism in Sturnira lilium (Chiroptera, Phyllostomidae): Can Pregnancy and Pup Carrying Be Responsible for Differences in Wing Shape?

[This corrects the article on p. e49734 in vol. 7.].

Correction: Sexual Dimorphism in Sturnira lilium (Chiroptera, Phyllostomidae): Can Pregnancy and Pup Carrying Be Responsible for Differences in Wing Shape?

[This corrects the article on p. e49734 in vol. 7.].

Sexual dimorphism in Sturnira lilium (Chiroptera, Phyllostomidae): can pregnancy and pup carrying be responsible for differences in wing shape?

Competition is one of the most cited mechanisms to explain secondary sexual dimorphism in animals. Nonetheless, it has been proposed that sexual dimorphism in bat wings is also a result of adaptive pressures to compensate additional weight caused by fetus or pup carrying during the reproductive period of females. The main objective of this study is to verify the existence of sexual dimorphism in Sturnira lilium wings. We employed geometric morphometrics techniques using anatomical landmarks superimposition to obtain size (Centroid Size) and shape variables of wings, which were reduced by Linear Discriminant Analysis (LDA). We also employed classical morphometrics using wing length measurements to compare efficiency between these two morphometric approaches and make comparisons using wing area measurements. LDA indicated significant differences between wing shapes of males and females, with 91% (stepwise classification) and 80% (leave-one-out cross validation) of correct classification. However, the size variable obtained did not contribute to such classifications. We have observed larger areas in female wings, but we found no differences in wing length measurements and no allometric effects in wing length, shape and area measurements. Interestingly, our study has provided evidences of morphological differences where classical morphometrics have failed. LDA and area measurements analyses revealed that females have a different area distribution in distinct portions of the wing, with wider dactylopatagia and plagiopatagia, and wingtips more triangular than males. No differences in body length or relative wing length were observed between the sexes, but pregnant females have more body weight than non-pregnant females and males. Our findings suggest that sexual dimorphism in the wing shape of S. lilium is probably related to the increase in flight efficiency of females during reproductive period. It decreases wing loading in specific portions of the wing and reduces energy cost to maintain a faster and maneuverable flight.